Basic Information
Locus ID:
jg29047
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 8992171 | 8993376 | + | jg29047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 31,819.61 Da | 37.58 | 96.48 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 100 | 262 | 1.0E-30 | IPR000490 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 21 | 73 | 3.0E-7 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 20 | 262 | 3.19E-44 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 99 | 269 | 3.3E-44 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 16 | 98 | 1.2E-11 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011087532.1 | glucan endo-1,3-beta-glucosidase 4-like [Sesamum indicum] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TNG0 | glucan endo-1,3-beta-glucosidase 4-like OS=Sesamum indicum OX=4182 GN=LOC105168989 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology