Basic Information
Locus ID:
jg29020
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 8516767 | 8518246 | + | jg29020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 28,592.69 Da | 45.64 | 102.03 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 19 | 181 | 1.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 211 | 2.1E-7 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012853428.1 | PREDICTED: F-box/FBD/LRR-repeat protein At5g22660-like [Erythranthe guttata] | 0 |
| TrEMBL | A0A830BTB0 | Fbd-associated F-box protein at5g60610 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_000832300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg22882, jg26218, jg28878, jg28880, jg28881, jg29020 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.110 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132623410, gene-LOC132640003 |