halophFGD

Basic Information

Locus ID: jg28881

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: FBD

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr18	5176967	5180500	-	jg28881

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.73	41,757.02 Da	54.56	97.79	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08387	FBD	287	320	6.1E-6	IPR006566
SUPERFAMILY	SSF52047	RNI-like	120	303	9.61E-9	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	117	308	7.1E-7	IPR032675

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_012853428.1	PREDICTED: F-box/FBD/LRR-repeat protein At5g22660-like [Erythranthe guttata]	0
TrEMBL	A0A830D7Q7	Putative F-box/FBD/LRR-repeat protein at1g78760 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_002388100 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg22882, jg26218, jg28878, jg28880, jg28881, jg29020
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000027l.110
Solanaceae	Lycium barbarum	2	gene-LOC132623410, gene-LOC132640003