Basic Information
Locus ID:
jg28708
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 3688334 | 3697243 | - | jg28708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 157,606.69 Da | 51.15 | 84.39 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 254 | 582 | 2.6E-107 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 248 | 615 | 1.44E-116 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 243 | 594 | 1.7E-132 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 246 | 590 | 4.0E-158 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 248 | 582 | 116.879364 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 478 | 489 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 532 | 553 | 5.7E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 479 | 497 | 5.7E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 320 | 341 | 5.7E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 446 | 463 | 5.7E-41 | IPR001752 |
| Coils | Coil | Coil | 755 | 775 | - | - |
| Coils | Coil | Coil | 596 | 616 | - | - |
| Coils | Coil | Coil | 1345 | 1365 | - | - |
| Coils | Coil | Coil | 826 | 846 | - | - |
| Coils | Coil | Coil | 1208 | 1235 | - | - |
| Coils | Coil | Coil | 665 | 692 | - | - |
| Coils | Coil | Coil | 1130 | 1150 | - | - |
| Coils | Coil | Coil | 1000 | 1020 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_011088306.1 | kinesin-like protein KIN-12D [Sesamum indicum] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TRG2 | kinesin-like protein KIN-12D OS=Sesamum indicum OX=4182 GN=LOC105169579 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology