Basic Information
Locus ID:
jg28324
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 669204 | 676197 | - | jg28324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 96,598.95 Da | 34.20 | 88.89 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 704 | 836 | 2.8E-14 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 397 | 9.52E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 844 | 1.04E-45 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 287 | 1.2E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 677 | 853 | 6.5E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 676 | 1.8E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 187 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 425 | 2.3E-15 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 459 | 842 | 12.485282 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 635 | 657 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011088110.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TQW9 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105169416 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology