Basic Information
Locus ID:
jg28322
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 649843 | 660174 | - | jg28322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 124,211.24 Da | 32.18 | 87.93 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 951 | 1083 | 2.5E-14 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 181 | 251 | 4.1E-6 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 278 | 313 | 3.4E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 861 | 1094 | 2.7E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 291 | 645 | 2.89E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 123 | 261 | 1.84E-14 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 534 | 686 | 1.7E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 951 | 1099 | 1.2E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 847 | 925 | 4.6E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 435 | 2.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 242 | 3.3E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 533 | 2.9E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 800 | 1089 | 12.65489 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 882 | 904 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011088110.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TQW9 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105169416 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology