Basic Information
Locus ID:
jg28321
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 637721 | 644182 | - | jg28321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 100,941.48 Da | 36.56 | 87.36 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 668 | 871 | 1.2E-31 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 138 | 159 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 881 | 8.06E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 375 | 3.91E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 419 | 1.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 653 | 1.9E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 180 | 5.4E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 890 | 2.5E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 282 | 4.6E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 631 | 874 | 2.9E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 875 | 28.908989 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011088111.2 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TWH3 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Sesamum indicum OX=4182 GN=LOC105169417 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology