Basic Information
Locus ID:
jg27983
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 12657868 | 12662743 | - | jg27983 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 60,980.71 Da | 35.56 | 106.09 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 26 | 435 | 2.9E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 138 | 189 | 3.8E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 18 | 443 | 7.0E-76 | IPR004709 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | 5.0 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 77 | 88 | 2.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 106 | 114 | 2.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 91 | 105 | 2.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 145 | 155 | 2.6E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_011090859.1 | sodium/hydrogen exchanger 1 [Sesamum indicum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9UA52 | Sodium/hydrogen exchanger OS=Sesamum indicum OX=4182 GN=LOC105171439 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology