Basic Information
Locus ID:
jg27827
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
IAA7
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 11363401 | 11365017 | - | jg27827 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 27,576.69 Da | 42.58 | 67.74 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 22 | 243 | 4.8E-86 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 133 | 233 | 8.83E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 129 | 246 | 1.2E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 134 | 234 | 22.799873 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 90 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23050.1 | indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_011091113.1 | auxin-responsive protein IAA14 [Sesamum indicum] | 0 |
| Q38825 | Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9G4T4 | Auxin-responsive protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27174 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology