Basic Information
Locus ID:
jg27134
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 1353795 | 1363614 | - | jg27134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 78,370.45 Da | 52.95 | 71.74 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.30.30.140 | - | 566 | 617 | 1.7E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 353 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_011082306.1 | uncharacterized protein LOC105165116 isoform X1 [Sesamum indicum] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9TMM7 | uncharacterized protein LOC105165116 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105165116 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology