Basic Information
Locus ID:
jg27091
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 1038561 | 1041460 | - | jg27091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 70,886.94 Da | 38.04 | 94.30 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 146 | 206 | 1.9E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 59 | 94 | 1.3E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 432 | 634 | 2.6E-24 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 77 | 239 | 1.28E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 640 | 1.54E-49 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 166 | 1.1E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 657 | 1.5E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 250 | 1.4E-18 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 63.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 342 | 639 | 23.269524 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_011083189.1 | probable inactive receptor kinase At1g48480 [Sesamum indicum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A830CVJ3 | Probable inactive receptor kinase at1g48480 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_002370300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology