Basic Information
Locus ID:
jg26897
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr29 | 10609150 | 10612670 | + | jg26897 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 60,511.36 Da | 59.24 | 74.35 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 156 | 230 | 5.33746E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 157 | 244 | 8.9E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 270 | 363 | 5.6E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 157 | 244 | 3.69E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 283 | 384 | 7.6E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 282 | 1.5E-17 | IPR011333 |
| SMART | SM00875 | BACK_2 | 262 | 364 | 1.7E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 122 | 247 | 5.2E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 156 | 216 | 12.743157 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_020549602.1 | BTB/POZ domain-containing protein POB1 isoform X1 [Sesamum indicum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9GJ26 | BTB domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22159 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology