Basic Information
Locus ID:
jg26615
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
NEK1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr29 | 6190326 | 6195832 | + | jg26615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 64,134.99 Da | 52.80 | 79.60 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 206 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 263 | 1.5E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 239 | 4.3E-57 | - |
| SMART | SM00220 | serkin_6 | 1 | 207 | 2.6E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 207 | 37.050175 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 74 | 86 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 337 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_011091894.1 | serine/threonine-protein kinase Nek3 isoform X1 [Sesamum indicum] | 0 |
| Q9SLI2 | Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9U2X7 | serine/threonine-protein kinase Nek3 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105172220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology