Basic Information
Locus ID:
jg26342
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
DHS2
Description:
Class-II DAHP synthetase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr29 | 1774125 | 1778197 | - | jg26342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 56,629.72 Da | 36.88 | 75.54 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01474 | Class-II DAHP synthetase family | 80 | 494 | 1.4E-181 | IPR002480 |
| SUPERFAMILY | SSF51569 | Aldolase | 74 | 494 | 3.08E-184 | - |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 282 | 500 | 6.6E-93 | IPR013785 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 113 | 281 | 5.6E-49 | IPR013785 |
| TIGRFAM | TIGR01358 | DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase | 80 | 496 | 2.4E-215 | IPR002480 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 79 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33510.1 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase. Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis | 0 |
| RefSeq | XP_012835400.1 | PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Erythranthe guttata] | 0 |
| A0A067XGX8 | Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Petunia hybrida OX=4102 GN=DAHP2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9HB38 | Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology