Basic Information
Locus ID:
jg26158
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr29 | 452745 | 457220 | + | jg26158 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 162,553.16 Da | 44.60 | 82.21 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 853 | 1075 | 2.918E-119 | - |
| Pfam | PF04548 | AIG1 family | 729 | 852 | 8.4E-23 | IPR006703 |
| Pfam | PF04548 | AIG1 family | 858 | 991 | 2.7E-26 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1215 | 1478 | 4.6E-112 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 852 | 992 | 5.33E-17 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 718 | 852 | 5.84E-15 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 855 | 1075 | 7.7E-54 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 697 | 854 | 2.7E-33 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 853 | 1480 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 855 | 1084 | 31.577682 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 606 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 471 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_011092883.1 | LOW QUALITY PROTEIN: translocase of chloroplast 120, chloroplastic [Sesamum indicum] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TZD8 | LOW QUALITY PROTEIN: translocase of chloroplast 120, chloroplastic OS=Sesamum indicum OX=4182 GN=LOC105172960 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology