Basic Information
Locus ID:
jg25771
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 9330226 | 9338130 | - | jg25771 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 19,674.12 Da | 70.08 | 69.77 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 27 | 165 | 4.05051E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 28 | 164 | 2.2E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 10 | 170 | 3.28E-64 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 19 | 168 | 6.2E-68 | IPR016135 |
| SMART | SM00212 | ubc_7 | 27 | 170 | 9.4E-69 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 24 | 170 | 60.598225 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 97 | 112 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_039143317.1 | ubiquitin-conjugating enzyme E2 2 [Dioscorea cayenensis subsp. rotundata] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1Q3C9L9 | UQ_con domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology