Basic Information
Locus ID:
jg2558
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr28 | 4529613 | 4534844 | + | jg2558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 73,242.97 Da | 62.15 | 87.32 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 546 | 636 | 3.1E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 391 | 537 | 7.3E-16 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 5.0E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 638 | 5.92E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 169 | 9.64E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 470 | 5.6E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 207 | 6.4E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 541 | 8.7E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 542 | 644 | 2.3E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 642 | 18.068213 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56050.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_011076664.1 | probable inactive receptor-like protein kinase At3g56050 [Sesamum indicum] | 0 |
| Q9LYN6 | Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana OX=3702 GN=At3g56050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T3N3 | probable inactive receptor-like protein kinase At3g56050 OS=Sesamum indicum OX=4182 GN=LOC105160864 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology