Basic Information
Locus ID:
jg25558
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 3902974 | 3905627 | + | jg25558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 69,558.53 Da | 34.62 | 98.16 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 61 | 121 | 4.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 57 | 1.1E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 358 | 616 | 2.1E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 621 | 1.54E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 202 | 1.28E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 128 | 4.2E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 639 | 2.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 321 | 429 | 2.6E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 129 | 212 | 4.8E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 132 | 156 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 201 | 9.1 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 626 | 30.082111 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_011083189.1 | probable inactive receptor kinase At1g48480 [Sesamum indicum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A830CVJ3 | Probable inactive receptor kinase at1g48480 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_002370300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology