Basic Information
Locus ID:
jg25002
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
FLS2
Description:
LRR receptor-like serine threonine-protein kinase FLS2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 11549636 | 11552574 | - | jg25002 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 76,601.50 Da | 39.46 | 104.94 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 279 | 322 | 6.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 137 | 405 | 1.36E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 523 | 685 | 1.96E-15 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 209 | 2.72E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 580 | 692 | 7.8E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 402 | 7.4E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 242 | 334 | 6.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 241 | 3.8E-52 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 285 | 308 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 73 | 97 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 49 | 72 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 332 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 193 | 16.0 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46330.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. | 0 |
| RefSeq | XP_011085266.1 | LRR receptor-like serine/threonine-protein kinase FLS2 [Sesamum indicum] | 0 |
| Q9FL28 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TJ69 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Sesamum indicum OX=4182 GN=LOC105167308 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25002 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016593 |
| Apiaceae | Apium graveolens | 2 | Ag6G01107, Ag7G00868 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G018220 |
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_01.1982.V1.1, AsparagusV1_02.1875.V1.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5862 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24943 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17193 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000022l.52 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012202 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9094 |