Basic Information
Locus ID:
jg24802
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
CPK15
Description:
Calcium-dependent protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 10196722 | 10198906 | - | jg24802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 45,977.73 Da | 50.43 | 80.78 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 352 | 397 | 8.55733E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 174 | 284 | 1.1E-12 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 70 | 171 | 4.7E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 313 | 1.4E-33 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 350 | 400 | 1.38E-9 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 147 | 7.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 349 | 1.7E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 350 | 407 | 1.9E-11 | - |
| SMART | SM00220 | serkin_6 | 70 | 295 | 9.1E-20 | IPR000719 |
| SMART | SM00054 | efh_1 | 372 | 399 | 0.0021 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 295 | 9.347534 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 402 | 9.380651 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 103 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04720.1 | calcium-dependent protein kinase 21. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_011096067.1 | calcium-dependent protein kinase [Sesamum indicum] | 0 |
| Q9ZSA2 | Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana OX=3702 GN=CPK21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UNG0 | calcium-dependent protein kinase OS=Sesamum indicum OX=4182 GN=LOC105175346 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for jg24802.