Basic Information
Locus ID:
jg24788
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 10084965 | 10091834 | + | jg24788 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 67,787.76 Da | 32.81 | 83.97 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 299 | 565 | 9.5E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 172 | 199 | 0.057 | IPR018392 |
| Pfam | PF01476 | LysM domain | 51 | 87 | 0.0051 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 567 | 7.96E-76 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 49 | 92 | 7.1E-6 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 578 | 3.4E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 367 | 9.9E-27 | - |
| SMART | SM00220 | serkin_6 | 297 | 569 | 4.5E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 570 | 38.94413 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 412 | 424 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_020551789.1 | lysM domain receptor-like kinase 3 isoform X4 [Sesamum indicum] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8V617 | lysM domain receptor-like kinase 3 isoform X4 OS=Sesamum indicum OX=4182 GN=LOC105168606 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology