Basic Information
Locus ID:
jg24782
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 10037750 | 10040716 | + | jg24782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 28,093.56 Da | 41.18 | 69.80 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 23 | 135 | 9.0E-23 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 140 | 184 | 1.6E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 132 | 184 | 9.08E-17 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 202 | 1.2E-19 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 2 | 133 | 6.9E-31 | IPR043151 |
| SMART | SM00249 | PHD_3 | 140 | 187 | 1.3E-8 | IPR001965 |
| SMART | SM00439 | BAH_4 | 21 | 136 | 7.9E-40 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 136 | 23.909683 | IPR001025 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_011086206.1 | chromatin remodeling protein EBS [Sesamum indicum] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TK92 | chromatin remodeling protein EBS OS=Sesamum indicum OX=4182 GN=LOC105168002 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology