Basic Information
Locus ID:
jg24700
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 9442934 | 9450003 | + | jg24700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 129,997.07 Da | 48.27 | 78.05 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 171 | 267 | 9.67989E-41 | - |
| CDD | cd13999 | STKc_MAP3K-like | 909 | 1166 | 3.55484E-114 | - |
| Pfam | PF00564 | PB1 domain | 184 | 268 | 1.9E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 905 | 1166 | 4.3E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 183 | 273 | 2.83E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 893 | 1165 | 4.1E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 890 | 989 | 3.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 990 | 1178 | 2.9E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 188 | 268 | 5.7E-12 | - |
| SMART | SM00220 | serkin_6 | 903 | 1169 | 3.4E-61 | IPR000719 |
| SMART | SM00666 | PB1_new | 182 | 269 | 1.1E-29 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 903 | 1168 | 41.502384 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1028 | 1040 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 909 | 934 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1022 | 1040 | 6.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1093 | 1115 | 6.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1137 | 1159 | 6.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 985 | 998 | 6.3E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 431 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011086337.1 | uncharacterized protein LOC105168100 isoform X1 [Sesamum indicum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GI27 | Tyrosine kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology