Basic Information
Locus ID:
jg24632
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
heat shock
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 8765685 | 8772220 | - | jg24632 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 85,246.03 Da | 37.85 | 83.94 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 89 | 245 | 7.26523E-80 | - |
| Pfam | PF00183 | Hsp90 protein | 227 | 731 | 4.2E-234 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 102 | 224 | 8.9E-10 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 306 | 561 | 6.14E-109 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 585 | 706 | 1.02E-38 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 79 | 256 | 2.07E-52 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 474 | 560 | 1.1E-41 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 561 | 710 | 1.0E-66 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 68 | 188 | 8.6E-46 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 305 | 473 | 2.4E-85 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 189 | 271 | 4.6E-23 | IPR036890 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 58 | 189 | 7.3E-46 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 185 | 741 | 1.2E-185 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 100 | 109 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 150 | 167 | 8.1E-45 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 101 | 123 | 8.1E-45 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 100 | 8.1E-45 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 185 | 8.1E-45 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 77 | 707 | 24.724983 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 289 | - | - |
| Coils | Coil | Coil | 270 | 300 | - | - |
| Coils | Coil | Coil | 565 | 585 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_011097724.1 | heat shock cognate protein 80-like [Sesamum indicum] | 0 |
| P36181 | Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UI13 | heat shock cognate protein 80-like OS=Sesamum indicum OX=4182 GN=LOC105176572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology