Basic Information
Locus ID:
jg24610
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 8600254 | 8602287 | + | jg24610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 75,000.18 Da | 40.01 | 88.35 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 31 | 256 | 2.83856E-93 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 363 | 630 | 5.49005E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 357 | 627 | 1.4E-51 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 34 | 262 | 8.1E-64 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 259 | 6.53E-64 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 629 | 2.7E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 269 | 8.7E-73 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 432 | 1.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 650 | 1.7E-63 | - |
| SMART | SM00220 | serkin_6 | 357 | 628 | 1.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 637 | 39.509491 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 386 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 290 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011097757.1 | probable L-type lectin-domain containing receptor kinase S.7 [Sesamum indicum] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9U9T7 | probable L-type lectin-domain containing receptor kinase S.7 OS=Sesamum indicum OX=4182 GN=LOC105176594 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology