halophFGD

Basic Information

Locus ID: jg24359

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: G-type lectin S-receptor-like serine threonine-protein kinase SD2-5

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr24	3079217	3081739	+	jg24359

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.47	71,954.96 Da	41.86	78.72	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00028	B_lectin	103	177	1.26271E-22	IPR001480
CDD	cd01098	PAN_AP_plant	356	443	1.32148E-11	-
Pfam	PF08276	PAN-like domain	359	403	1.9E-5	IPR003609
Pfam	PF00954	S-locus glycoprotein domain	253	329	5.5E-6	IPR000858
Pfam	PF01453	D-mannose binding lectin	105	202	1.3E-19	IPR001480
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	505	611	1.96E-12	IPR011009
SUPERFAMILY	SSF51110	alpha-D-mannose-specific plant lectins	102	228	7.72E-26	IPR036426
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	495	622	1.4E-17	-
Gene3D	G3DSA:2.90.10.10	-	64	176	1.4E-15	IPR036426
SMART	SM00108	blect_4	38	177	6.8E-15	IPR001480
ProSiteProfiles	PS50927	Bulb-type lectin domain profile.	44	175	14.051898	IPR001480
ProSiteProfiles	PS50948	PAN/Apple domain profile.	359	439	8.094967	IPR003609

Gene Ontology

Biological Process:

GO:0048544 (recognition of pollen)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G32300.1	S-domain-2 5.
RefSeq	XP_020554457.1	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Sesamum indicum]
Swiss-Prot	Q8RWZ5	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1
TrEMBL	A0A8M8V7A2	Receptor-like serine/threonine-protein kinase OS=Sesamum indicum OX=4182 GN=LOC105177053 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg24359
Aizoaceae	Mesembryanthemum crystallinum	4	gene_19177, gene_19178, gene_4785, gene_7482
Amaranthaceae	Atriplex hortensis	5	Ah005114, Ah005117, Ah007693, Ah022328, Ah022465
Amaranthaceae	Beta vulgaris	4	BVRB_3g065150, BVRB_4g074270, BVRB_4g074280, BVRB_4g074290
Amaranthaceae	Suaeda glauca	2	Sgl02509, Sgl07664
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000009847, gene:ENSEOMG00000011424 ... gene:ENSEOMG00000011450, gene:ENSEOMG00000013724, gene:ENSEOMG00000015884, gene:ENSEOMG00000029879, gene:ENSEOMG00000029958, gene:ENSEOMG00000030946, gene:ENSEOMG00000031064, gene:ENSEOMG00000031399, gene:ENSEOMG00000032273, gene:ENSEOMG00000041411, gene:ENSEOMG00000042200
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0024870, CQ.Regalona.r1.3AG0024890 ... CQ.Regalona.r1.3BG0025820, CQ.Regalona.r1.3BG0026000, CQ.Regalona.r1.4AG0002630, CQ.Regalona.r1.4AG0017780, CQ.Regalona.r1.4BG0002760
Anacardiaceae	Pistacia vera	11	pistato.v30026130, pistato.v30089080, pistato.v30089100 ... pistato.v30162690, pistato.v30162700, pistato.v30162720, pistato.v30162920, pistato.v30162930, pistato.v30163000, pistato.v30224630, pistato.v30224650
Arecaceae	Cocos nucifera	2	COCNU_02G002000, COCNU_02G002010
Arecaceae	Phoenix dactylifera	1	gene-LOC103705662
Asparagaceae	Asparagus officinalis	1	AsparagusV1_01.1931.V1.1
Asteraceae	Flaveria trinervia	6	Ftri8G19079, Ftri8G27439, Ftri9G08012, Ftri9G11321 ... Ftri9G28704, Ftri9G31713
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno07g07670, gene.Cymno07g07700
Hydrocharitaceae	Thalassia testudinum	12	gene.Thate02g09070, gene.Thate04g22650, gene.Thate07g19770 ... gene.Thate07g19780, gene.Thate07g19790, gene.Thate07g19800, gene.Thate07g19820, gene.Thate07g19830, gene.Thate07g19840, gene.Thate07g19850, gene.Thate07g19860, gene.Thate07g19870
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3732
Poaceae	Echinochloa crus-galli	3	AH02.4576, BH02.270, CH02.4672
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_1AG0002620, gene-QOZ80_1AG0002640 ... gene-QOZ80_1AG0002660, gene-QOZ80_1AG0002670, gene-QOZ80_1BG0051160, gene-QOZ80_1BG0051180, gene-QOZ80_1BG0055910, gene-QOZ80_1BG0067970, gene-QOZ80_2AG0107270, gene-QOZ80_2BG0160910, gene-QOZ80_3AG0244700, gene-QOZ80_3BG0283380, gene-QOZ80_8BG0658750
Poaceae	Hordeum vulgare	21	HORVU.MOREX.r3.1HG0006430.1.CDS1 ... HORVU.MOREX.r3.2HG0159130.1.CDS1, HORVU.MOREX.r3.2HG0192100.1.CDS1, HORVU.MOREX.r3.2HG0214510.1.CDS1, HORVU.MOREX.r3.3HG0220390.1.CDS1, HORVU.MOREX.r3.3HG0220400.1.CDS1, HORVU.MOREX.r3.3HG0220440.1.CDS1, HORVU.MOREX.r3.3HG0220520.1, HORVU.MOREX.r3.3HG0229400.1.CDS1, HORVU.MOREX.r3.3HG0229420.1.CDS1, HORVU.MOREX.r3.3HG0323310.1.CDS1, HORVU.MOREX.r3.3HG0323400.1.CDS1, HORVU.MOREX.r3.5HG0420290.1.CDS1, HORVU.MOREX.r3.5HG0421130.1.CDS1, HORVU.MOREX.r3.6HG0631280.1, HORVU.MOREX.r3.7HG0718670.1.CDS1, HORVU.MOREX.r3.UnG0753190.1, HORVU.MOREX.r3.UnG0753260.1.CDS1, HORVU.MOREX.r3.UnG0786390.1.CDS1, HORVU.MOREX.r3.UnG0786400.1.CDS1, HORVU.MOREX.r3.UnG0786410.1.CDS1
Poaceae	Lolium multiflorum	17	gene-QYE76_002030, gene-QYE76_019552, gene-QYE76_021848 ... gene-QYE76_023347, gene-QYE76_026445, gene-QYE76_026447, gene-QYE76_034369, gene-QYE76_043374, gene-QYE76_049436, gene-QYE76_049437, gene-QYE76_049438, gene-QYE76_049439, gene-QYE76_052037, gene-QYE76_052038, gene-QYE76_053976, gene-QYE76_058930, gene-QYE76_068918
Poaceae	Oryza coarctata	12	Oco02G004640, Oco02G031510, Oco03G006400, Oco04G006620 ... Oco07G002610, Oco07G002620, Oco07G002630, Oco08G002910, Oco11G010850, Oco12G010930, Oco12G010940, Oco14G011560
Poaceae	Oryza sativa	12	LOC_Os01g02310.1, LOC_Os01g10700.1, LOC_Os01g10710.1 ... LOC_Os01g72810.1, LOC_Os02g13965.1, LOC_Os04g23600.1, LOC_Os04g23620.1, LOC_Os04g23700.1, LOC_Os04g23720.1, LOC_Os04g23760.1, LOC_Os06g35850.2, LOC_Os06g35870.1
Poaceae	Paspalum vaginatum	12	gene-BS78_03G024500, gene-BS78_03G024600, gene-BS78_K087600 ... gene-BS78_03G093300, gene-BS78_03G157400, gene-BS78_03G175900, gene-BS78_03G408100, gene-BS78_04G098600, gene-BS78_09G028500, gene-BS78_10G161900, gene-BS78_10G229700, gene-BS78_K088200
Poaceae	Puccinellia tenuiflora	17	Pt_Chr0205501, Pt_Chr0205503, Pt_Chr0206392, Pt_Chr0207234 ... Pt_Chr0207237, Pt_Chr0207240, Pt_Chr0300557, Pt_Chr0303151, Pt_Chr0303201, Pt_Chr0600642, Pt_Chr0604539, Pt_Chr0604540, Pt_Chr0605617, Pt_Chr0605618, Pt_Chr0605627, Pt_Chr0605836, Pt_Chr0703746
Poaceae	Sporobolus alterniflorus	11	Chr02G000730, Chr03G003040, Chr03G008130, Chr03G008660 ... Chr05G033990, Chr08G001970, Chr0G004050, Chr12G004470, Chr16G007110, Chr16G007120, Chr17G006490
Poaceae	Thinopyrum elongatum	19	Tel1E01G038200, Tel1E01G194800, Tel2E01G491000 ... Tel2E01G718200, Tel2E01G718300, Tel2E01G729200, Tel3E01G025400, Tel3E01G119800, Tel3E01G120600, Tel3E01G120700, Tel3E01G120800, Tel3E01G820100, Tel3E01G820200, Tel3E01G821100, Tel3E01G821200, Tel5E01G030500, Tel6E01G733200, Tel6E01G734500, Tel6E01G744700
Poaceae	Triticum dicoccoides	48	gene_TRIDC1AG001820, gene_TRIDC1BG002600 ... gene_TRIDC2AG039140, gene_TRIDC2AG061830, gene_TRIDC2BG042150, gene_TRIDC2BG064440, gene_TRIDC2BG064450, gene_TRIDC2BG065670, gene_TRIDC3AG001360, gene_TRIDC3AG001380, gene_TRIDC3AG001390, gene_TRIDC3AG001440, gene_TRIDC3AG001460, gene_TRIDC3AG007380, gene_TRIDC3AG007440, gene_TRIDC3AG007490, gene_TRIDC3AG071090, gene_TRIDC3BG002100, gene_TRIDC3BG002170, gene_TRIDC3BG002180, gene_TRIDC3BG002190, gene_TRIDC3BG004400, gene_TRIDC3BG009920, gene_TRIDC3BG010040, gene_TRIDC3BG010050, gene_TRIDC3BG010190, gene_TRIDC3BG010210, gene_TRIDC3BG010240, gene_TRIDC3BG022020, gene_TRIDC3BG081050, gene_TRIDC3BG081200, gene_TRIDC3BG081210, gene_TRIDC4AG003660, gene_TRIDC5AG065850, gene_TRIDC5BG001980, gene_TRIDC5BG070640, gene_TRIDC6AG059130, gene_TRIDC6AG059140, gene_TRIDC6AG059160, gene_TRIDC6AG059200, gene_TRIDC6AG059230, gene_TRIDC6AG059350, gene_TRIDC6BG069930, gene_TRIDC6BG069990, gene_TRIDC6BG070010, gene_TRIDC6BG072330, gene_TRIDC7AG049550, gene_TRIDC7BG044310
Poaceae	Triticum aestivum	57	TraesCS1A02G017200.1.cds1, TraesCS1D02G014300.1.cds1 ... TraesCS2A02G271900.1, TraesCS2A02G429400.1.cds1, TraesCS2A02G580900.1.cds1, TraesCS2B02G290100.3.cds1, TraesCS2B02G449900.1.cds1, TraesCS2D02G419700.1, TraesCS2D02G419800.1, TraesCS2D02G427100.1.cds1, TraesCS2D02G591000.1.cds1, TraesCS3A02G014700.1.cds1, TraesCS3A02G015100.1.cds1, TraesCS3A02G015300.1.cds1, TraesCS3A02G016100.1.cds1, TraesCS3A02G016300.1.cds1, TraesCS3A02G063700.1, TraesCS3A02G063800.1.cds1, TraesCS3A02G064300.1, TraesCS3A02G064400.1, TraesCS3A02G498900.1.cds1, TraesCS3A02G499500.1.cds1, TraesCS3B02G075300.1.cds1, TraesCS3B02G076900.1.cds1, TraesCS3B02G077000.1.cds1, TraesCS3B02G079400.1, TraesCS3B02G562800.1.cds1, TraesCS3B02G562900.1.cds1, TraesCS3D02G012800.1, TraesCS3D02G012900.1, TraesCS3D02G013600.1.cds1, TraesCS3D02G062500.1, TraesCS3D02G062600.1.cds1, TraesCS3D02G063800.1.cds1, TraesCS3D02G064700.2.cds1, TraesCS3D02G064800.1, TraesCS3D02G505700.1.cds1, TraesCS3D02G506400.1.cds1, TraesCS4A02G026200.1.cds1, TraesCS5A02G458600.1.cds1, TraesCS5B02G468100.1.cds1, TraesCS5D02G018800.1.cds1, TraesCS5D02G469700.1.cds1, TraesCS6A02G402100.1, TraesCS6B02G444200.1.cds1, TraesCS6B02G444600.1, TraesCS6B02G445200.1, TraesCS6D02G386200.1, TraesCS6D02G386500.1.cds1, TraesCS7A02G354700.1, TraesCS7B02G273000.1.cds1, TraesCS7D02G368100.1.cds1, TraesCSU02G045100.1.cds1, TraesCSU02G045400.1, TraesCSU02G045500.1.cds1, TraesCSU02G166600.1.cds1, TraesCSU02G171900.1
Poaceae	Zea mays	7	Zm00001eb201520_P001, Zm00001eb202030_P001 ... Zm00001eb239040_P001, Zm00001eb338170_P001, Zm00001eb362630_P001, Zm00001eb419980_P001, Zm00001eb419990_P001
Poaceae	Zoysia japonica	3	nbis-gene-34233, nbis-gene-52413, nbis-gene-52414
Poaceae	Zoysia macrostachya	4	Zma_g10484, Zma_g10539, Zma_g11969, Zma_g15420
Portulacaceae	Portulaca oleracea	7	evm.TU.LG02.508, evm.TU.LG07.554, evm.TU.LG07.558 ... evm.TU.LG07.559, evm.TU.LG07.87, evm.TU.LG15.384, evm.TU.LG15.388
Posidoniaceae	Posidonia oceanica	22	gene.Posoc01g40780, gene.Posoc03g25890, gene.Posoc04g14890 ... gene.Posoc04g19400, gene.Posoc04g19430, gene.Posoc04g20240, gene.Posoc04g21400, gene.Posoc04g22480, gene.Posoc05g08910, gene.Posoc05g17770, gene.Posoc05g20320, gene.Posoc08g15000, gene.Posoc08g15010, gene.Posoc08g15020, gene.Posoc08g15060, gene.Posoc08g15090, gene.Posoc08g15100, gene.Posoc08g15110, gene.Posoc08g15290, gene.Posoc08g15310, gene.Posoc08g15330, gene.Posoc08g15350
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.48567.3, evm.TU.Scaffold_18_RagTag.527 ... evm.TU.Scaffold_18_RagTag.530, evm.TU.Scaffold_5_RagTag.1282
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-11758, nbisL1-mrna-11760, nbisL1-mrna-17918 ... nbisL1-mrna-27901, nbisL1-mrna-27903, nbisL1-mrna-27990, nbisL1-mrna-27992
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-16317, nbisL1-mrna-20730, nbisL1-mrna-3845
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-11170, nbisL1-mrna-7947, nbisL1-mrna-8298
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000006l.292, add.evm.TU.utg000007l.74 ... add.evm.TU.utg000023l.57
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-19672, nbisL1-mrna-20659
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-19978, nbisL1-mrna-21299
Salicaceae	Populus euphratica	5	populus_peu09898, populus_peu10333, populus_peu10334 ... populus_peu18497, populus_peu30551
Solanaceae	Lycium barbarum	7	gene-LOC132618445, gene-LOC132618975, gene-LOC132619284 ... gene-LOC132619413, gene-LOC132619415, gene-LOC132619417, gene-LOC132623835
Solanaceae	Solanum chilense	7	SOLCI001701700, SOLCI001701800, SOLCI004848300 ... SOLCI004848400, SOLCI005160200, SOLCI005367800, SOLCI007028500
Solanaceae	Solanum pennellii	7	gene-LOC107023989, gene-LOC107024453, gene-LOC107024599 ... gene-LOC107024636, gene-LOC107024664, gene-LOC107025475, gene-LOC107025563
Zosteraceae	Zostera marina	2	Zosma04g09770.v3.1, Zosma04g09790.v3.1