Basic Information
Locus ID:
jg24336
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 2511106 | 2517125 | + | jg24336 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 58,217.00 Da | 44.05 | 88.46 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 188 | 454 | 1.72419E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 186 | 451 | 2.4E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 166 | 459 | 4.26E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 164 | 257 | 1.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 258 | 472 | 2.4E-66 | - |
| SMART | SM00220 | serkin_6 | 182 | 453 | 4.6E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 182 | 459 | 39.325748 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 188 | 211 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 520 | - | - |
| Coils | Coil | Coil | 202 | 222 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020554516.1 | probable receptor-like protein kinase At2g42960 isoform X2 [Sesamum indicum] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8M8VEE3 | probable receptor-like protein kinase At2g42960 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105177061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology