Basic Information
Locus ID:
jg24259
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 1457583 | 1465926 | - | jg24259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 75,750.57 Da | 50.50 | 76.94 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 57 | 324 | 4.26303E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 53 | 254 | 2.9E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 322 | 1.89E-80 | IPR011009 |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers | 427 | 471 | 2.38E-5 | IPR036236 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 126 | 8.1E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 335 | 3.3E-58 | - |
| SMART | SM00614 | bed5 | 424 | 478 | 2.5E-17 | - |
| SMART | SM00220 | serkin_6 | 51 | 396 | 1.1E-33 | IPR000719 |
| ProSiteProfiles | PS50808 | Zinc finger BED-type profile. | 424 | 482 | 11.267843 | IPR003656 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 328 | 37.332855 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 57 | 79 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 421 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020554387.1 | putative serine/threonine-protein kinase isoform X2 [Sesamum indicum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8V741 | putative serine/threonine-protein kinase isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105176948 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg24259 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_24363 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah001568, Ah021035 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00009261 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G21155 |
| Poaceae | Triticum aestivum | 1 | TraesCS6D02G013700.1 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132629007 |
| Solanaceae | Solanum chilense | 1 | SOLCI004251100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107032162 |