Basic Information
Locus ID:
jg24183
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 818904 | 820121 | - | jg24183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 45,390.50 Da | 43.31 | 64.49 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 44 | 168 | 6.93664E-23 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 270 | 343 | 1.2E-12 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 361 | 405 | 1.0E-4 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 182 | 3.1E-20 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 220 | 3.53E-15 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 32 | 166 | 9.3E-9 | IPR036426 |
| SMART | SM00108 | blect_4 | 43 | 168 | 1.3E-20 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 355 | 405 | 7.872702 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 38 | 165 | 10.317947 | IPR001480 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 335 | 348 | - | IPR000742 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03230.8 | - | 0 |
| RefSeq | XP_012830076.1 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Erythranthe guttata] | 0 |
| Q9ZR08 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 | 0 | |
| TrEMBL | A0A2G9FXC4 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29811 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||