Basic Information
Locus ID:
jg24177
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 775839 | 781969 | + | jg24177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 88,893.46 Da | 53.32 | 74.31 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 356 | 443 | 5.40867E-10 | - |
| CDD | cd00028 | B_lectin | 44 | 168 | 9.00234E-27 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 622 | 732 | 1.1E-9 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 182 | 2.5E-22 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 358 | 423 | 6.2E-10 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 262 | 341 | 1.7E-12 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 219 | 1.14E-16 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 525 | 768 | 6.35E-40 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 501 | 574 | 1.5E-13 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 32 | 166 | 1.9E-10 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 741 | 2.1E-30 | - |
| SMART | SM00108 | blect_4 | 43 | 168 | 2.9E-24 | IPR001480 |
| SMART | SM00473 | ntp_6 | 359 | 442 | 0.0029 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 611 | 781 | 2.7E-56 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 574 | 613 | 1.6E-12 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 10 | 573 | 1.3E-96 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 38 | 165 | 11.507186 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 352 | 440 | 8.579911 | IPR003609 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 333 | 346 | - | IPR000742 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 778 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03230.8 | - | 0 |
| RefSeq | XP_012830071.1 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Erythranthe guttata] | 0 |
| Q9ZR08 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 | 0 | |
| TrEMBL | A0A2G9GT09 | Receptor-like serine/threonine-protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19071 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||