Basic Information
Locus ID:
jg2417
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr28 | 2858314 | 2861619 | + | jg2417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 76,204.19 Da | 39.66 | 92.75 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 72 | 331 | 5.9E-29 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 381 | 641 | 4.1E-24 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 338 | 3.28E-44 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 642 | 1.5E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 653 | 6.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 443 | 7.7E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 345 | 3.2E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 143 | 8.2E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 335 | 24.004492 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 664 | 22.449751 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 97 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23740.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076515.1 | protein STRUBBELIG-RECEPTOR FAMILY 4 [Sesamum indicum] | 0 |
| Q9SUQ3 | Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SZL7 | protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Sesamum indicum OX=4182 GN=LOC105160734 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for jg2417.