Basic Information
Locus ID:
jg24008
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17427005 | 17429281 | - | jg24008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 49,934.43 Da | 43.88 | 67.98 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 236 | 320 | 1.2E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 123 | - | - |
| Coils | Coil | Coil | 244 | 278 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_020549432.1 | protein WVD2-like 6 isoform X3 [Sesamum indicum] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8USF6 | protein WVD2-like 6 isoform X3 OS=Sesamum indicum OX=4182 GN=LOC105155724 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology