Basic Information
Locus ID:
jg24007
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17422621 | 17425329 | + | jg24007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.36 | 66,851.44 Da | 39.73 | 100.26 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 541 | 563 | 0.27 | IPR001611 |
| Pfam | PF00646 | F-box domain | 62 | 104 | 2.2E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 239 | 262 | 0.033 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 99 | 8.76E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 330 | 563 | 5.76E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 187 | 353 | 3.73E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 625 | 9.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 447 | 2.8E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 316 | 4.5E-30 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 461 | 486 | 0.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 265 | 290 | 4.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 567 | 592 | 79.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 371 | 396 | 29.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 239 | 264 | 1.0E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 541 | 565 | 8.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 213 | 238 | 2.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 423 | 448 | 8.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 488 | 513 | 1.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 515 | 540 | 2.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 291 | 316 | 25.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 397 | 422 | 0.14 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011081561.1 | EIN3-binding F-box protein 1-like isoform X1 [Sesamum indicum] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TCZ4 | EIN3-binding F-box protein 1-like isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105164578 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology