Basic Information
Locus ID:
jg23902
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16632673 | 16635669 | + | jg23902 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 90,061.99 Da | 36.35 | 97.12 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 56 | 3.6E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 250 | 265 | 0.035 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 478 | 618 | 1.6E-18 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 155 | 191 | 4.6E-7 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 466 | 1.83E-6 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 292 | 1.7E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 792 | 1.97E-54 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 199 | 1.7E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 620 | 2.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 316 | 5.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 469 | 2.6E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 621 | 795 | 1.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 131 | 1.6E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 82 | 105 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 245 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 8.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 176 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 807 | 20.49926 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 226 | 247 | 7.819765 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 251 | 273 | 7.342321 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 155 | 177 | 7.55024 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 482 | 505 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 249 | 262 | 4.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 156 | 169 | 4.2E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011081744.1 | receptor-like protein kinase 5 [Sesamum indicum] | 0 |
| Q9FGL5 | Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TLA1 | receptor-like protein kinase 5 OS=Sesamum indicum OX=4182 GN=LOC105164717 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology