Basic Information
Locus ID:
jg23899
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16620031 | 16622287 | + | jg23899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 80,882.19 Da | 47.72 | 94.78 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 84 | 143 | 3.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 57 | 2.8E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 155 | 177 | 0.26 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 251 | 263 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 417 | 696 | 1.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 714 | 7.55E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 291 | 5.78E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 396 | 494 | 9.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 709 | 3.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 223 | 1.2E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 152 | 2.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 312 | 7.1E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 82 | 105 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 176 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 130 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 415 | 697 | 1.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 699 | 35.297558 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 250 | 273 | 7.018892 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 155 | 177 | 7.488635 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 550 | 562 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 444 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 248 | 261 | 5.1E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 156 | 169 | 5.1E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011081744.1 | receptor-like protein kinase 5 [Sesamum indicum] | 0 |
| Q9FGL5 | Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TLA1 | receptor-like protein kinase 5 OS=Sesamum indicum OX=4182 GN=LOC105164717 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology