Basic Information
Locus ID:
jg23892
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16576071 | 16580878 | - | jg23892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 31,195.53 Da | 40.16 | 78.21 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17667 | Fungal protein kinase | 23 | 110 | 4.0E-6 | IPR040976 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 179 | 1.78E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 15 | 195 | 7.7E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 200 | 14.082424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 26 | 38 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_047177510.1 | casein kinase 1-like protein HD16 [Vigna umbellata] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | S8BWH9 | Protein kinase domain-containing protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_16089 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23892 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0010480 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0301251, Pt_Chr0306813 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG062280 |