Basic Information
Locus ID:
jg23483
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 12993180 | 12994574 | - | jg23483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 50,607.53 Da | 37.39 | 86.96 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 23 | 99 | 1.34948E-17 | - |
| Pfam | PF02214 | BTB/POZ domain | 23 | 107 | 7.2E-12 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 107 | 1.88E-14 | IPR011333 |
| SUPERFAMILY | SSF75011 | 3-carboxy-cis,cis-mucoante lactonizing enzyme | 114 | 352 | 7.06E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 114 | 2.2E-17 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 135 | 463 | 3.7E-8 | IPR015943 |
| SMART | SM00225 | BTB_4 | 21 | 116 | 3.9E-6 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_011080938.1 | BTB/POZ domain-containing protein At5g41330-like [Sesamum indicum] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2Z7ASF2 | BTB/POZ domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_28027 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology