Basic Information
Locus ID:
jg23422
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BAG domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 12035454 | 12036574 | - | jg23422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 29,531.73 Da | 49.03 | 80.98 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 60 | 128 | 8.3E-6 | IPR000626 |
| Pfam | PF02179 | BAG domain | 155 | 228 | 6.1E-12 | IPR003103 |
| SUPERFAMILY | SSF63491 | BAG domain | 113 | 234 | 1.31E-20 | IPR036533 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 52 | 131 | 9.9E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 59 | 129 | 3.0E-20 | - |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 130 | 235 | 2.9E-38 | IPR036533 |
| SMART | SM00213 | ubq_7 | 60 | 130 | 2.7E-4 | IPR000626 |
| SMART | SM00264 | BAG_1 | 153 | 231 | 3.9E-5 | IPR003103 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 153 | 231 | 10.339751 | IPR003103 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 58 | 128 | 10.897798 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 266 | - | - |
| Coils | Coil | Coil | 147 | 174 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07220.1 | BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_051137453.1 | BAG family molecular chaperone regulator 3-like [Andrographis paniculata] | 0 |
| Q9LYP4 | BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9G5B7 | BAG family molecular chaperone regulator 3 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology