Basic Information
Locus ID:
jg22829
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3438776 | 3440408 | - | jg22829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 55,258.83 Da | 48.23 | 92.99 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 98 | 142 | 0.00233214 | IPR018392 |
| Pfam | PF01476 | LysM domain | 104 | 143 | 3.5E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 243 | 335 | 3.1E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 246 | 484 | 1.17E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 491 | 3.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 247 | 345 | 5.2E-16 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 85 | 153 | 4.3E-7 | IPR036779 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 97 | 142 | 10.631858 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 235 | 499 | 8.76804 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011083913.1 | protein LYK5-like [Sesamum indicum] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TFG7 | protein LYK5-like OS=Sesamum indicum OX=4182 GN=LOC105166302 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||