halophFGD

Basic Information

Locus ID: jg22594

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: Belongs to the multicopper oxidase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	1297606	1299732	-	jg22594

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.78	53,221.50 Da	37.61	73.35	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd13897	CuRO_3_LCC_plant	321	460	9.40183E-84	IPR034289
CDD	cd13875	CuRO_2_LCC_plant	74	219	3.69953E-87	IPR034285
Pfam	PF07731	Multicopper oxidase	327	460	2.8E-40	IPR011706
Pfam	PF00394	Multicopper oxidase	74	222	1.0E-37	IPR001117
Pfam	PF07732	Multicopper oxidase	2	61	3.2E-13	IPR011707
SUPERFAMILY	SSF49503	Cupredoxins	5	86	1.0E-17	IPR008972
SUPERFAMILY	SSF49503	Cupredoxins	288	477	2.6E-43	IPR008972
SUPERFAMILY	SSF49503	Cupredoxins	67	254	9.91E-44	IPR008972
Gene3D	G3DSA:2.60.40.420	-	1	68	3.8E-12	IPR008972
Gene3D	G3DSA:2.60.40.420	-	71	256	5.6E-44	IPR008972
Gene3D	G3DSA:2.60.40.420	-	282	477	5.0E-60	IPR008972
TIGRFAM	TIGR03389	laccase: laccase	3	477	5.1E-214	IPR017761
ProSitePatterns	PS00079	Multicopper oxidases signature 1.	435	455	-	IPR033138
ProSitePatterns	PS00080	Multicopper oxidases signature 2.	440	451	-	IPR002355

Gene Ontology

Biological Process:

GO:0046274 (lignin catabolic process)

Molecular Function:

GO:0005507 (copper ion binding) GO:0016491 (oxidoreductase activity) GO:0052716 (hydroquinone:oxygen oxidoreductase activity)

Cellular Component:

GO:0048046 (apoplast)

KEGG Pathway

KO Term:

K05909 (laccase [EC:1.10.3.2])

Best hit

Source	Best Hit ID	Description
TAIR	AT5G09360.1	laccase 14. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
RefSeq	XP_020547488.1	laccase-14-like [Sesamum indicum]
Swiss-Prot	Q9FY79	Laccase-14 OS=Arabidopsis thaliana OX=3702 GN=LAC14 PE=2 SV=1
TrEMBL	A0A8M8UL72	Laccase OS=Sesamum indicum OX=4182 GN=LOC105179108 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	15	jg10052, jg10854, jg14229, jg14230, jg14812, jg16684, jg2547 ... jg16685, jg16686, jg22591, jg22593, jg22594, jg26703, jg34106, jg6083
Aizoaceae	Mesembryanthemum crystallinum	7	gene_17043, gene_18707, gene_22744, gene_2441, gene_7059 ... gene_7061, gene_9464
Amaranthaceae	Atriplex hortensis	5	Ah001566, Ah020682, Ah025048, Ah025068, Ah035124
Amaranthaceae	Beta vulgaris	4	BVRB_5g113370, BVRB_7g175010, BVRB_7g175020, BVRB_7g175030
Amaranthaceae	Salicornia bigelovii	13	Sbi_jg1891, Sbi_jg1892, Sbi_jg1894, Sbi_jg1895, Sbi_jg1896 ... Sbi_jg21510, Sbi_jg22307, Sbi_jg30834, Sbi_jg34626, Sbi_jg34627, Sbi_jg34632, Sbi_jg34633, Sbi_jg58431
Amaranthaceae	Salicornia europaea	5	Seu_jg16235, Seu_jg28306, Seu_jg2867, Seu_jg2869, Seu_jg2870
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00003083, GOSA_00003084, GOSA_00004883, GOSA_00008826 ... GOSA_00010996
Amaranthaceae	Suaeda glauca	11	Sgl04925, Sgl09981, Sgl54967, Sgl60226, Sgl62781, Sgl67397 ... Sgl73151, Sgl73152, Sgl76696, Sgl76697, Sgl76698
Amaranthaceae	Chenopodium album	17	gene:ENSEOMG00000006435, gene:ENSEOMG00000014255 ... gene:ENSEOMG00000014920, gene:ENSEOMG00000018460, gene:ENSEOMG00000021423, gene:ENSEOMG00000023971, gene:ENSEOMG00000026560, gene:ENSEOMG00000030892, gene:ENSEOMG00000035193, gene:ENSEOMG00000035566, gene:ENSEOMG00000037838, gene:ENSEOMG00000040318, gene:ENSEOMG00000042175, gene:ENSEOMG00000044589, gene:ENSEOMG00000047654, gene:ENSEOMG00000047727, gene:ENSEOMG00000049862
Amaranthaceae	Chenopodium quinoa	12	CQ.Regalona.r1.1AG0016660, CQ.Regalona.r1.1BG0008930 ... CQ.Regalona.r1.1BG0020490, CQ.Regalona.r1.2AG0022220, CQ.Regalona.r1.3AG0016230, CQ.Regalona.r1.3BG0016040, CQ.Regalona.r1.5AG0017950, CQ.Regalona.r1.5BG0019060, CQ.Regalona.r1.7AG0001820, CQ.Regalona.r1.7AG0001830, CQ.Regalona.r1.9BG0003870, CQ.Regalona.r1.9BG0003880
Anacardiaceae	Pistacia vera	8	pistato.v30055330, pistato.v30063600, pistato.v30063610 ... pistato.v30063620, pistato.v30063630, pistato.v30063650, pistato.v30063660, pistato.v30285160
Apiaceae	Apium graveolens	10	Ag10G00486, Ag10G01328, Ag10G01605, Ag10G01746, Ag11G04201 ... Ag1G00619, Ag2G00875, Ag5G01447, Ag8G00002, Ag8G00423
Arecaceae	Cocos nucifera	10	COCNU_04G000940, COCNU_04G000950, COCNU_04G003860 ... COCNU_05G007090, COCNU_12G006590, COCNU_12G008270, COCNU_12G008280, COCNU_13G002540, scaffold003092G000010, scaffold022438G000010
Arecaceae	Phoenix dactylifera	15	gene-LOC103697976, gene-LOC103703490, gene-LOC103704087 ... gene-LOC103704089, gene-LOC103705353, gene-LOC103705361, gene-LOC103708923, gene-LOC103714375, gene-LOC103715505, gene-LOC103715511, gene-LOC103717518, gene-LOC103717762, gene-LOC103721728, gene-LOC103722532, gene-LOC120109569
Asparagaceae	Asparagus officinalis	6	AsparagusV1_03.123.V1.1, AsparagusV1_05.471.V1.1 ... AsparagusV1_07.1748.V1.1, AsparagusV1_07.53.V1.1, AsparagusV1_08.2493.V1.1, AsparagusV1_08.3389.V1.1
Asteraceae	Flaveria trinervia	15	Ftri10G00065, Ftri10G07134, Ftri10G11633, Ftri10G17502 ... Ftri10G22997, Ftri10G32570, Ftri11G06350, Ftri16G06746, Ftri16G07953, Ftri17G16267, Ftri18G27733, Ftri1G09682, Ftri9G15786, Ftri9G23175, Ftri9G33014
Brassicaceae	Arabidopsis thaliana	9	AT2G30210.1, AT2G40370.1, AT3G09220.1, AT5G01040.1 ... AT5G01050.1, AT5G05390.1, AT5G07130.1, AT5G09360.1, AT5G48100.1
Brassicaceae	Eutrema salsugineum	11	Thhalv10002968m.g.v1.0, Thhalv10003921m.g.v1.0 ... Thhalv10013058m.g.v1.0, Thhalv10013097m.g.v1.0, Thhalv10013732m.g.v1.0, Thhalv10015329m.g.v1.0, Thhalv10015589m.g.v1.0, Thhalv10015612m.g.v1.0, Thhalv10016439m.g.v1.0, Thhalv10016445m.g.v1.0, Thhalv10020392m.g.v1.0
Brassicaceae	Schrenkiella parvula	7	Sp2g18520.v2.2, Sp3g07600.v2.2, Sp4g12800.v2.2 ... Sp4g22690.v2.2, Sp6g33970.v2.2, Sp6g37430.v2.2, SpUn0354_0010.v2.2
Brassicaceae	Brassica nigra	13	BniB01g005020.2N, BniB01g013900.2N, BniB01g055460.2N ... BniB01g055470.2N, BniB02g052310.2N, BniB02g055180.2N, BniB02g069360.2N, BniB04g006140.2N, BniB05g029150.2N, BniB05g031380.2N, BniB06g004500.2N, BniB06g019340.2N, BniB08g000440.2N
Casuarinaceae	Casuarina equisetifolia	19	Ceq02G0073, Ceq03G0213, Ceq03G1493, Ceq03G1510, Ceq03G1511 ... Ceq03G1512, Ceq03G1513, Ceq03G1514, Ceq03G1515, Ceq03G1516, Ceq03G1517, Ceq03G1519, Ceq03G1522, Ceq08G1073, Ceq08G1806, Ceq09G0446, Ceq09G0448, Ceq09G0449, Ceq09G0451
Casuarinaceae	Casuarina glauca	21	Cgl01G1085, Cgl02G0082, Cgl03G0255, Cgl03G0257, Cgl03G1629 ... Cgl03G1648, Cgl03G1649, Cgl03G1650, Cgl03G1651, Cgl03G1652, Cgl03G1653, Cgl03G1654, Cgl03G1655, Cgl03G1656, Cgl08G0514, Cgl08G1099, Cgl08G1866, Cgl09G0482, Cgl09G0484, Cgl09G0485, Cgl09G0488
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g18430, gene.Cymno03g01640, gene.Cymno04g18340 ... gene.Cymno05g18470
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g03020
Malvaceae	Hibiscus hamabo Siebold & Zucc.	7	nbisL1-mrna-1727, nbisL1-mrna-1728, nbisL1-mrna-1985 ... nbisL1-mrna-3631, nbisL1-mrna-3632, nbisL1-mrna-5869, nbisL1-mrna-6069
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.1095, evm.TU.LG02.1924, evm.TU.LG09.1022
Plantaginaceae	Plantago ovata	14	Pov_00002422, Pov_00002814, Pov_00005321, Pov_00006457 ... Pov_00006497, Pov_00011750, Pov_00011770, Pov_00016366, Pov_00021990, Pov_00023106, Pov_00024326, Pov_00024327, Pov_00036372, Pov_00040602
Plumbaginaceae	Limonium bicolor	22	Lb1G00684, Lb1G00685, Lb1G01934, Lb1G02676, Lb1G06440 ... Lb1G07646, Lb1G07647, Lb1G07648, Lb1G07649, Lb1G07650, Lb1G07651, Lb2G10531, Lb2G11533, Lb2G13605, Lb2G15269, Lb3G19312, Lb3G20927, Lb6G29855, Lb6G29857, Lb6G29861, Lb6G29863, Lb6G30399
Poaceae	Echinochloa crus-galli	36	AH01.3947, AH02.1468, AH02.3731, AH02.3883, AH02.3885 ... AH04.1154, AH04.37, AH05.70, AH06.3000, AH07.2444, AH07.3492, AH07.3494, BH01.4345, BH02.3740, BH02.3905, BH04.1121, BH04.45, BH04.46, BH05.3234, BH06.2779, BH07.2253, BH07.3306, BH07.3309, BH07.4054, BH07.4214, BH07.4216, CH01.4578, CH04.1305, CH04.49, CH05.3295, CH05.681, CH05.9, CH07.2326, CH07.3367, CH07.3370, Contig181.235
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_1AG0038420, gene-QOZ80_1AG0040020 ... gene-QOZ80_1BG0088480, gene-QOZ80_1BG0090050, gene-QOZ80_1BG0090070, gene-QOZ80_2AG0145740, gene-QOZ80_3AG0244770, gene-QOZ80_3BG0283320, gene-QOZ80_5AG0386920, gene-QOZ80_5BG0434080, gene-QOZ80_6BG0504650, gene-QOZ80_9AG0672170, gene-QOZ80_9AG0678810, gene-QOZ80_9BG0695710, gene-QOZ80_9BG0702540
Poaceae	Hordeum vulgare	10	HORVU.MOREX.r3.1HG0008790.1, HORVU.MOREX.r3.2HG0158150.1 ... HORVU.MOREX.r3.3HG0301840.1, HORVU.MOREX.r3.3HG0304320.1, HORVU.MOREX.r3.4HG0383780.1, HORVU.MOREX.r3.5HG0465270.1, HORVU.MOREX.r3.6HG0614780.1, HORVU.MOREX.r3.6HG0614790.1, HORVU.MOREX.r3.7HG0664300.1, HORVU.MOREX.r3.7HG0712750.1
Poaceae	Lolium multiflorum	22	gene-QYE76_003148, gene-QYE76_003713, gene-QYE76_016359 ... gene-QYE76_020525, gene-QYE76_025363, gene-QYE76_025368, gene-QYE76_025373, gene-QYE76_025375, gene-QYE76_025376, gene-QYE76_025377, gene-QYE76_026062, gene-QYE76_043126, gene-QYE76_055627, gene-QYE76_055783, gene-QYE76_056411, gene-QYE76_056412, gene-QYE76_056413, gene-QYE76_059767, gene-QYE76_068612, gene-QYE76_068632, gene-QYE76_071589, gene-QYE76_071700
Poaceae	Oryza coarctata	12	Oco01G023790, Oco01G025020, Oco01G025040, Oco02G024580 ... Oco02G025930, Oco04G022310, Oco05G010990, Oco06G011240, Oco14G000060, Oco22G000210, Oco23G004550, Oco24G004020
Poaceae	Oryza sativa	9	LOC_Os01g27700.1, LOC_Os01g61160.1, LOC_Os01g63200.1 ... LOC_Os02g51440.1, LOC_Os03g18640.1, LOC_Os10g30140.1, LOC_Os11g01730.1, LOC_Os11g47390.1, LOC_Os12g01730.1
Poaceae	Paspalum vaginatum	12	gene-BS78_01G385400, gene-BS78_02G008400 ... gene-BS78_02G378100, gene-BS78_03G322300, gene-BS78_03G337700, gene-BS78_04G269500, gene-BS78_04G269800, gene-BS78_04G279500, gene-BS78_04G279600, gene-BS78_05G006600, gene-BS78_08G074200, gene-BS78_10G119300
Poaceae	Puccinellia tenuiflora	18	Pt_Chr0102492, Pt_Chr0102493, Pt_Chr0102519, Pt_Chr0106460 ... Pt_Chr0200515, Pt_Chr0202700, Pt_Chr0202704, Pt_Chr0203297, Pt_Chr0203298, Pt_Chr0205885, Pt_Chr0205925, Pt_Chr0205927, Pt_Chr0303309, Pt_Chr0601895, Pt_Chr0702853, Pt_Chr0704910, Pt_Chr0705234, Pt_Ctg00148
Poaceae	Sporobolus alterniflorus	17	Chr01G032350, Chr02G004590, Chr02G005860, Chr03G019160 ... Chr04G009040, Chr04G020570, Chr05G000390, Chr05G027480, Chr05G028770, Chr06G002180, Chr06G026880, Chr07G002640, Chr08G022860, Chr12G007240, Chr17G007200, Chr19G011440, Chr27G004700
Poaceae	Thinopyrum elongatum	22	Tel1E01G091700, Tel2E01G485700, Tel3E01G556000 ... Tel3E01G582700, Tel4E01G339400, Tel5E01G060300, Tel5E01G060400, Tel5E01G060500, Tel5E01G060600, Tel5E01G060700, Tel5E01G060800, Tel5E01G261800, Tel5E01G823100, Tel6E01G049500, Tel6E01G546700, Tel6E01G546800, Tel7E01G287400, Tel7E01G287500, Tel7E01G287600, Tel7E01G287700, Tel7E01G287800, Tel7E01G592700
Poaceae	Triticum dicoccoides	19	gene_TRIDC1AG005040, gene_TRIDC1BG007060 ... gene_TRIDC2AG035780, gene_TRIDC2BG041670, gene_TRIDC3AG050120, gene_TRIDC3AG052680, gene_TRIDC3BG056360, gene_TRIDC3BG059140, gene_TRIDC4AG015820, gene_TRIDC4BG033020, gene_TRIDC5AG003510, gene_TRIDC5AG025300, gene_TRIDC5BG026460, gene_TRIDC6AG045890, gene_TRIDC7AG021760, gene_TRIDC7AG046800, gene_TRIDC7BG011940, gene_TRIDC7BG011970, gene_TRIDC7BG040920
Poaceae	Triticum aestivum	35	TraesCS1A02G043900.1, TraesCS1B02G056900.1 ... TraesCS1D02G044300.1, TraesCS1D02G044600.1, TraesCS2A02G255500.1, TraesCS2B02G287000.1, TraesCS2D02G267200.1, TraesCS3A02G348000.1, TraesCS3A02G365500.1, TraesCS3B02G379900.1, TraesCS3B02G397300.1, TraesCS3D02G341600.1, TraesCS3D02G358600.1, TraesCS4A02G114700.1, TraesCS4B02G189500.1, TraesCS4D02G190900.1, TraesCS5A02G025000.1, TraesCS5A02G151400.1, TraesCS5B02G149900.1, TraesCS5D02G031400.1, TraesCS5D02G156500.1, TraesCS6A02G304900.1, TraesCS6A02G305000.1, TraesCS6D02G284100.1, TraesCS6D02G284200.1, TraesCS7A02G175000.1, TraesCS7A02G337400.1, TraesCS7B02G079800.1, TraesCS7B02G079900.1, TraesCS7B02G080100.1, TraesCS7B02G248800.1, TraesCS7D02G176300.1, TraesCS7D02G176400.1, TraesCS7D02G176500.1, TraesCS7D02G345000.1
Poaceae	Zea mays	10	Zm00001eb013810_P001, Zm00001eb147860_P001 ... Zm00001eb149240_P001, Zm00001eb168770_P001, Zm00001eb194370_P001, Zm00001eb195100_P001, Zm00001eb254960_P001, Zm00001eb298030_P001, Zm00001eb368580_P001, Zm00001eb408530_P002
Poaceae	Zoysia japonica	12	nbis-gene-11536, nbis-gene-12390, nbis-gene-1927 ... nbis-gene-25833, nbis-gene-31490, nbis-gene-31631, nbis-gene-34527, nbis-gene-34528, nbis-gene-3587, nbis-gene-35965, nbis-gene-57998, nbis-gene-8698
Poaceae	Zoysia macrostachya	10	Zma_g11450, Zma_g11548, Zma_g1424, Zma_g14435, Zma_g17860 ... Zma_g24604, Zma_g24945, Zma_g25688, Zma_g3812, Zma_g8917
Portulacaceae	Portulaca oleracea	20	evm.TU.LG01.987, evm.TU.LG01.993, evm.TU.LG02.2745 ... evm.TU.LG02.2746, evm.TU.LG03.2036, evm.TU.LG03.2189, evm.TU.LG05.538, evm.TU.LG10.22, evm.TU.LG12.482, evm.TU.LG13.804, evm.TU.LG14.336, evm.TU.LG17.1248, evm.TU.LG17.17, evm.TU.LG18.25, evm.TU.LG18.26, evm.TU.LG19.1379, evm.TU.LG21.479, evm.TU.LG23.949, evm.TU.LG25.788, evm.TU.LG26.994
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g37320, gene.Posoc01g37930, gene.Posoc01g40340 ... gene.Posoc02g09230, gene.Posoc02g16120
Rhizophoraceae	Bruguiera sexangula	9	evm.TU.48890.1, evm.TU.48890.2, evm.TU.48972.1 ... evm.TU.48972.2, evm.TU.Scaffold_13_RagTag.630, evm.TU.Scaffold_1_RagTag.1748, evm.TU.Scaffold_4_RagTag.907, evm.TU.Scaffold_4_RagTag.908, evm.TU.Scaffold_7_RagTag.1280
Rhizophoraceae	Carallia pectinifolia	9	nbisL1-mrna-18534, nbisL1-mrna-18535, nbisL1-mrna-18537 ... nbisL1-mrna-27430, nbisL1-mrna-27431, nbisL1-mrna-30437, nbisL1-mrna-4521, nbisL1-mrna-5539, nbisL1-mrna-5540
Rhizophoraceae	Ceriops tagal	6	nbisL1-mrna-1432, nbisL1-mrna-16988, nbisL1-mrna-17183 ... nbisL1-mrna-17386, nbisL1-mrna-2178, nbisL1-mrna-450
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-13252, nbisL1-mrna-1490, nbisL1-mrna-16012 ... nbisL1-mrna-16015, nbisL1-mrna-3753
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000002l.320, evm.TU.utg000008l.583 ... evm.TU.utg000015l.355, evm.TU.utg000016l.655
Rhizophoraceae	Kandelia obovata	5	Maker00000164, Maker00001457, Maker00015213, Maker00015401 ... Maker00016672
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-14321, nbisL1-mrna-4276, nbisL1-mrna-4277 ... nbisL1-mrna-4998, nbisL1-mrna-8977
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-13706, nbisL1-mrna-13707, nbisL1-mrna-15159 ... nbisL1-mrna-15161, nbisL1-mrna-18490, nbisL1-mrna-19385, nbisL1-mrna-19386
Salicaceae	Populus euphratica	16	populus_peu02393, populus_peu02570, populus_peu06599 ... populus_peu06600, populus_peu11379, populus_peu14951, populus_peu16972, populus_peu18593, populus_peu18829, populus_peu20482, populus_peu20483, populus_peu25558, populus_peu25560, populus_peu25561, populus_peu25721, populus_peu37712
Solanaceae	Lycium barbarum	12	gene-LOC132603915, gene-LOC132606440, gene-LOC132609116 ... gene-LOC132614315, gene-LOC132618574, gene-LOC132619011, gene-LOC132626487, gene-LOC132627421, gene-LOC132640423, gene-LOC132640424, gene-LOC132640426, gene-LOC132640430
Solanaceae	Solanum chilense	11	SOLCI001083900, SOLCI001143100, SOLCI002497300 ... SOLCI002830000, SOLCI004237700, SOLCI004778500, SOLCI004778700, SOLCI005324900, SOLCI005671000, SOLCI006012200, SOLCI006012300
Solanaceae	Solanum pennellii	12	gene-LOC107006014, gene-LOC107017207, gene-LOC107018975 ... gene-LOC107019108, gene-LOC107019878, gene-LOC107020069, gene-LOC107021753, gene-LOC107021770, gene-LOC107021808, gene-LOC107021857, gene-LOC107022684, gene-LOC107024584
Tamaricaceae	Reaumuria soongarica	13	STRG.19376_chr07_+, STRG.3145_chr01_+, STRG.9614_chr03_- ... gene_14807, gene_15870, gene_16955, gene_16956, gene_2952, gene_3599, gene_7654, gene_9029, gene_9030, gene_9031
Tamaricaceae	Tamarix chinensis	13	TC01G4368, TC02G2083, TC02G2085, TC04G0077, TC04G1959 ... TC07G0354, TC07G0355, TC10G1116, TC10G2435, TC10G2444, TC11G0023, TC11G1315, TC11G2310
Zosteraceae	Zostera marina	2	Zosma02g19500.v3.1, Zosma02g21870.v3.1