Basic Information
Locus ID:
jg2256
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr28 | 1570463 | 1573209 | - | jg2256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 80,242.16 Da | 42.14 | 83.63 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 14 | 202 | 3.19989E-109 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 27 | 181 | 4.9E-14 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 184 | 692 | 8.4E-236 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 262 | 517 | 4.17E-110 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 213 | 2.07E-74 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 541 | 663 | 9.42E-39 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 430 | 516 | 6.2E-42 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 261 | 429 | 6.3E-87 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 517 | 668 | 1.3E-65 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 2 | 228 | 1.9E-96 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 27 | 182 | 4.0E-9 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 697 | 5.8E-261 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 25 | 34 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 188 | 206 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 75 | 92 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 93 | 110 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 5 | 25 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 26 | 48 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 118 | 140 | 5.7E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 5.7E-84 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 2 | 664 | 27.314167 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 672 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 247 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_021592620.1 | heat shock protein 83 [Manihot esculenta] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9UIA2 | HATPase_c domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_14G022300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology