Basic Information
Locus ID:
jg22537
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 815435 | 817265 | + | jg22537 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.74 | 35,459.69 Da | 33.49 | 89.29 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 12 | 302 | 1.5E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 305 | 2.7E-94 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 98 | 2.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 309 | 5.3E-69 | - |
| SMART | SM00220 | serkin_6 | 12 | 302 | 3.1E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 302 | 45.177223 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 139 | 151 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 18 | 41 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 0 |
| RefSeq | XP_011099956.1 | cell division control protein 2 homolog D [Sesamum indicum] | 0 |
| Q38775 | Cell division control protein 2 homolog D OS=Antirrhinum majus OX=4151 GN=CDC2D PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UNL0 | cell division control protein 2 homolog D OS=Sesamum indicum OX=4182 GN=LOC105178226 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology