Basic Information
Locus ID:
jg22501
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 395076 | 407723 | - | jg22501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 103,571.19 Da | 54.63 | 81.77 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 743 | 900 | 1.59496E-58 | - |
| Pfam | PF06337 | DUSP domain | 61 | 164 | 7.1E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 334 | 899 | 1.8E-86 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 331 | 902 | 1.06E-112 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 34 | 164 | 8.89E-26 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 321 | 527 | 1.1E-68 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 25 | 177 | 6.1E-34 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 718 | 910 | 1.0E-56 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 178 | 259 | 9.6E-7 | - |
| SMART | SM00695 | dusp | 56 | 167 | 4.1E-23 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 37 | 164 | 18.204321 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 333 | 902 | 57.841965 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 844 | 861 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 334 | 349 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_020550363.1 | ubiquitin carboxyl-terminal hydrolase 9 [Sesamum indicum] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2G9GL77 | Ubiquitin carboxyl-terminal hydrolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21686 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology