Basic Information
Locus ID:
jg22075
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
dehydration-induced
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 14009676 | 14011904 | - | jg22075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 26,944.87 Da | 64.20 | 71.39 | -0.60 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06760.1 | Drought-responsive family protein. | 0 |
| RefSeq | XP_011096346.1 | protein DEHYDRATION-INDUCED 19 homolog 4 [Sesamum indicum] | 0 |
| Q688X9 | Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UEH5 | protein DEHYDRATION-INDUCED 19 homolog 4 OS=Sesamum indicum OX=4182 GN=LOC105175566 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg20262, jg22075 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22219 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018087 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g182620 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg41331, Sbi_jg48798 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28037 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017081 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl45985, Sgl45986, Sgl50681, Sgl50682 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012350, gene:ENSEOMG00000032852 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0005710, CQ.Regalona.r1.8BG0005940 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30073060 |
| Apiaceae | Apium graveolens | 2 | Ag7G00779, Ag8G00899 |
| Arecaceae | Cocos nucifera | 3 | COCNU_02G004300, COCNU_03G011100, scaffold011959G000040 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103702473, gene-LOC103713198, gene-LOC103721235 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.706.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G13461 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G2184 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2469 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g11400 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g08320 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-5489, nbisL1-mrna-7609 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.911 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00038301 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2702, AH05.1411, AH07.1496, BH02.2785, BH05.1579 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_1AG0028170, gene-QOZ80_1BG0078360 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0087360.2, HORVU.MOREX.r3.3HG0279260.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_015505, gene-QYE76_054514 |
| Poaceae | Oryza coarctata | 6 | Oco01G016920, Oco02G017130, Oco03G008460, Oco04G008880 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os01g48190.1, LOC_Os02g20170.1, LOC_Os05g48800.2 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G226500, gene-BS78_09G234100 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0506061, Pt_Chr0605128, Pt_Chr0605139, Pt_Chr0605691 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G015560, Chr02G013060, Chr03G013160, Chr05G020640 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G646700, Tel3E01G415700 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG058040, gene_TRIDC1BG066950 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS1A02G395200.1, TraesCS1B02G423500.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb157160_P006, Zm00001eb240660_P002 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-13673, nbis-gene-26049, nbis-gene-34050 ... |
| Poaceae | Zoysia macrostachya | 5 | Zma_g10849, Zma_g15290, Zma_g27372, Zma_g28793, Zma_g8406 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.354, evm.TU.LG04.401 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g20990 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.251 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29443 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6067 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20927 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.155 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015934 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-5942, nbisL1-mrna-5943 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16872 |
| Salicaceae | Populus euphratica | 3 | populus_peu10028, populus_peu18134, populus_peu18141 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132622307, gene-LOC132631433 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011199 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.2451_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1365 |
| Zosteraceae | Zostera marina | 1 | Zosma05g25630.v3.1 |