Basic Information
Locus ID:
jg21931
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12919903 | 12920781 | - | jg21931 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 23,343.29 Da | 52.87 | 76.73 | -0.42 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022882234.1 | putative F-box protein At5g50220 [Olea europaea var. sylvestris] | 0 |
| TrEMBL | A0A2G9H9Q9 | F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13116 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg21930, jg21931 |
| Apiaceae | Apium graveolens | 5 | Ag2G00184, Ag4G00712, Ag5G00094, Ag6G00932, Ag6G00934 |
| Plantaginaceae | Plantago ovata | 6 | Pov_00005860, Pov_00005862, Pov_00005863, Pov_00005864 ... |
| Poaceae | Echinochloa crus-galli | 1 | AH05.4160 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_17_RagTag.746, evm.TU.Scaffold_17_RagTag.806 |
| Rhizophoraceae | Carallia pectinifolia | 11 | nbisL1-mrna-22820, nbisL1-mrna-22893, nbisL1-mrna-23439 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20068 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.404 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00004309, Maker00004369 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-21034, nbisL1-mrna-21035, nbisL1-mrna-21043 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-14243, nbisL1-mrna-14263 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599182 |
| Solanaceae | Solanum chilense | 2 | SOLCI001944300, SOLCI007333400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114075087 |