Basic Information
Locus ID:
jg21926
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12886698 | 12888251 | + | jg21926 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 23,567.53 Da | 50.41 | 80.98 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 10 | 76 | 6.2E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 198 | 3.75E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 2 | 80 | 2.4E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 135 | 211 | 1.4E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 214 | 8.810442 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 80 | 15.013358 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 169 | 191 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.3 | - | 0 |
| RefSeq | XP_028103496.1 | cysteine-rich receptor-like protein kinase 8 [Camellia sinensis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A4S4EZ93 | Cysteine-rich receptor-like protein kinase 25 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||