Basic Information
Locus ID:
jg21923
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12844978 | 12851490 | + | jg21923 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 116,943.42 Da | 52.62 | 77.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 539 | 632 | 1.5E-15 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 333 | 422 | 2.0E-11 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 26 | 119 | 4.6E-14 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 134 | 233 | 2.8E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 653 | 740 | 4.3E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 510 | 1.55E-20 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 824 | 912 | 1.19E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 409 | 507 | 1.3E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 810 | 890 | 6.6E-16 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 531 | 635 | 2.0E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 302 | 404 | 5.2E-27 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 642 | 744 | 5.7E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 130 | 235 | 6.6E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 19 | 122 | 1.2E-18 | IPR038408 |
| SMART | SM00219 | tyrkin_6 | 329 | 493 | 7.1E-4 | IPR020635 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 19 | 122 | 16.31686 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 128 | 235 | 16.470747 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 533 | 636 | 14.415919 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 640 | 744 | 17.665625 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23250.2 | - | 0 |
| RefSeq | XP_040375459.1 | uncharacterized protein LOC112201911 [Rosa chinensis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A445D840 | Cysteine-rich receptor-like protein kinase 10 OS=Arachis hypogaea OX=3818 GN=Ahy_A05g025068 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg21923, jg21925, jg21927, jg581 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1555 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1737 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.581 |
| Salicaceae | Populus euphratica | 1 | populus_peu10241 |