Basic Information
Locus ID:
jg21257
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2895614 | 2899815 | - | jg21257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 48,275.19 Da | 30.88 | 117.68 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 279 | 418 | 9.6E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 88 | 244 | 6.2E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 118 | 257 | 3.3E-13 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 264 | 422 | 2.7E-17 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 74 | 421 | 1.8E-98 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 57 | 421 | 2.4E-115 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_011082886.1 | vacuolar cation/proton exchanger 3 isoform X2 [Sesamum indicum] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TP44 | Vacuolar cation/proton exchanger OS=Sesamum indicum OX=4182 GN=LOC105165536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology