Basic Information
Locus ID:
jg20922
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 21662652 | 21666436 | + | jg20922 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 34,723.52 Da | 49.55 | 84.48 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 46 | 258 | 1.45E-10 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 58 | 291 | 1.0E-6 | IPR015943 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18900.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_011095677.1 | WD repeat-containing protein 75 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9UCQ5 | WD repeat-containing protein 75 OS=Sesamum indicum OX=4182 GN=LOC105175056 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20922 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19051 |