Basic Information
Locus ID:
jg20918
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 21628436 | 21633694 | - | jg20918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 140,842.81 Da | 48.76 | 74.52 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1002 | 1259 | 3.06302E-112 | - |
| CDD | cd06410 | PB1_UP2 | 190 | 284 | 1.11465E-44 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 998 | 1259 | 8.6E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 204 | 283 | 2.0E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 984 | 1258 | 1.78E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 202 | 292 | 3.27E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1084 | 1277 | 2.7E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 287 | 3.5E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 989 | 1083 | 5.7E-26 | - |
| SMART | SM00220 | serkin_6 | 996 | 1262 | 1.4E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 201 | 286 | 4.8E-27 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 996 | 1262 | 41.035961 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1121 | 1133 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1002 | 1027 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1115 | 1133 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1186 | 1208 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1230 | 1252 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1078 | 1091 | 8.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 636 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 379 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011096900.1 | uncharacterized protein LOC105175953 isoform X1 [Sesamum indicum] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UB32 | uncharacterized protein LOC105175953 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105175953 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology